
Confirm selected SOM grid stability candidates
Source:R/SOMGridStability.R
ConfirmSOMGridStability.RdRefit exact user-shortlisted rows from
ScreenSOMGridStability(screen_scope = "joint") with more 90% subsample
refits. For the default map-only screen, choose and freeze a map first,
then compare k with CreateClusterModel_SOM_MClust(). This function does
not select candidates: every requested joint-screen row is returned as a
separate, projectable SOM + Mclust model.
Usage
ConfirmSOMGridStability(
screen,
candidates,
confirm_resamples = 30L,
distance_percentile = 0.95,
inclusion_probability = 0.6
)Arguments
- screen
A
SOMGridStabilityScreenobject.- candidates
Values of
.ScreenRow, or rows from the screen decision table containing that column.- confirm_resamples
Number of stability refits, default 30.
- distance_percentile
Distance percentile threshold for participant influence flags.
- inclusion_probability
Inclusion-probability threshold for influence flags.